项目作者: elaspic

项目描述 :
Predicting the effect of mutations on protein stability and protein-protein interaction affinity.
高级语言: Python
项目地址: git://github.com/elaspic/elaspic.git
创建时间: 2015-07-20T21:08:50Z
项目社区:https://github.com/elaspic/elaspic

开源协议:

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ELASPIC

conda
pipeline status
coverage report

Introduction

Welcome to the ELASPIC code repository!

Complete documentation is available on ReadTheDocs.

For a small number of mutations, you can try running ELASPIC using our webserver.

Development

  • Use the issue tracker to discuss changes.

References

Strokach, A., Kim, P.M. (2016) Predicting the Effect of Mutations on a Genome-Wide Scale. MSc Thesis, University of Toronto.

Witvliet, D., Strokach, A., Giraldo-Forero, A.F., Teyra, J., Colak, R., and Kim, P.M. (2016)
ELASPIC web-server: proteome-wide structure based prediction of mutation effects on protein stability and binding affinity. Bioinformatics 32(10): 1589-1591. doi: 10.1093/bioinformatics/btw031.

Berliner N, Teyra J, Çolak R, Garcia Lopez S, Kim PM (2014) Combining Structural Modeling with Ensemble Machine Learning to Accurately Predict Protein Fold Stability and Binding Affinity Effects upon Mutation. PLoS ONE 9(9): e107353. doi: 10.1371/journal.pone.0107353.

License

MIT